Services

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Precision Medicine Portal
Precision Medicine Portal
Links to multiple data sources, including quality registers and KIARVA (an open-source immunology database).
GeneSPIDER version: v2
GeneSPIDER version: v2
GeneSPIDER(v2) is a Matlab toolbox for gene regulatory network inference and benchmarking with controlled network and data properties.
Swedish Reference Genome Portal
Swedish Reference Genome Portal
Portal that highlights, aggregates, and displays genome data of non-human eukaryotic species studied in Sweden

Resources

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The Data-driven life cycle
The Data-driven life cycle
Learn more about the Data lifecycle and find out which services are offered by the Data Centre and NBIS in this interactive guide.
Data sources
Data sources
Sources of data that can potentially be used by researchers in Sweden. The list includes places where data and be accessed and/or submitted.
Compute resources in Sweden
Compute resources in Sweden
Information about the compute resources (primarily for hosting and analysis) available in Sweden, as well as how to apply.

Data Highlights

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New tool allows users to navigate both full-length protein and domain orthologs.
November 7, 2024
New tool allows users to navigate both full-length protein and domain orthologs.
Figure 1 from Salignon et al. (2024) showing an overview of the cactus pipeline.
August 19, 2024
New pipeline for mRNA-Seq and ATAC-Seq analysis allows for biological insights without in-depth bioinformatics skills
Figure 1 from Pochon et al. (2023) showing ancient metgenomic profiling(aMeta) workflow overview.
April 15, 2024
aMeta; a new metagenomic profiling workflow for ancient DNA

What's new?

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Recently published items in the SciLifeLab Data Repository

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Apps recently deployed on SciLifeLab Serve

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